2009: Evolutionary Genomics

5th Annual German-Japanese Colloquium

Jointly organized by JSPS and Düsseldorf University

Date: March 8-10, 2009
Venue: Bad Honnef

PROGRAM

March 8th

18:00 Reception Restaurant Palmengarten, Seminaris Hotel

March 9th

09:00 Introductory remarks
• Prof. Dr. William F. Martin (Düsseldorf University)
• Prof. Dr. Naruya Saitō (National Institute of Genetics, Mishima)
09:15 Toward a systematic approach to microbial genome comparison: Identification of genomic core among moderately related genomes
Dr. Ikuo Uchiyama (National Institute for Basic Biology)
Abstract Uchiyama (36 KB)
09:45 Towards an understanding of bacterial speciation
Prof. Dr. Jörg Overmann (Munich University)
Abstract Overmann (36KB)
10:15 Untangling microbial communities through their DNA – from oceans to the human body
Dr. Jeroen Raes (European Molecular Biology Laboratory, Heidelberg)
Abstract Raes (40 KB)
10:45 Coffee break
11:00 Evolution of molecular networks
Prof. Dr. Martin J. Lercher (Düsseldorf University)
Abstract Lercher (152 KB)
11:30 Evolution of duplicated genes under the effect of gene conversion
Dr. Kosuke Teshima (The Graduate University for Advanced Studies, Hayama)
Abstract Teshima (52 KB)
12:00 Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
Dr. Tan Dagan (Düsseldorf University)
Abstract Dagan (32 KB)
12:30 Lunch
14:00 The power of gene duplications: how the orchid got its lip
Prof. Dr. Günter Theissen (Jena University)
Abstract Theissen (40 KB)
14:30 Evolution of developmental regulatory system in plants based on large scale phylogenetic analyses utilizing whole genome shotgun sequence data
Dr. Tomoaki Nishiyama (Kanazawa University)
Abstract Nishiyama (32 KB)
15:00 Genes and their phenotypes in Drosophila
Dr. Aya Takahashi (National Institute of Genetics, Mishima)
Abstract Takahashi (32 KB)
15:30 Analysis of recent gene duplication and conversion in the Drosophila melanogaster genome
Dr. Noaki Osada (National Institute of Biomedical Innovation, Osaka)
Abstract Osada (32 KB)
16:00 Coffee break
16:15 Are microsporidia really derived sexual fungi?
Dr. Ingo Ebersberger (Center for Integrative Bioinformatics, Vienna)
Abstract Ebersberger (32 KB)
16:45 The evolution of isochore genome compartments
Dr. Satoshi Ōta (RIKEN Bioresource Center, Tsukuba)
Abstract Ōta (32 KB)
17:15 The supragenome and the world of non-coding RNAs in cyanobacteria
Prof. Dr. Wolfgang R. Hess (Freiburg University)
Abstract Hess (36 KB)
17:45 Genomics of phototrophic protists: Communication between compartments and the extracellular/intracellular transition
Franziska Hempel (Marburg University) and Prof. Dr. Uwe Maier (Marburg University)
Abstract Hempel (32 KB)
Abstract Maier (28 KB)
19:00 Dinner

March 10th

08:30 Evolution of primate-specific and mammalian-specific highly concerved non-coding genomic region
Prof. Dr. Naruya Saitō (National Institute of Genetics, Mishima)
Abstract Saitō (28 KB)
09:00 Populations genetics of the X-chromosome and the autosomes in Drosophila melanogaster: Comparing patterns of SNP diversity and gene expression
Dr. Stephan Hutter (Munich University)
Abstract Hutter (32 KB)
09:30 Multiple genome comparison within a species reveals a unit of evolution spanning two ORFs in tandem paralog clusters
Takeshi Tsuru (University of Tokyo)
Abstract Tsuru (40 KB)
10:00 Coffee break
10:30 Evolutionary dynamics of ”functional“ processed pseudogenes that stabilize Makorin1 mRNAs in mammals
Dr. Satoko Kaneko (Ochanomizu University, Tokyo)
Abstract Kaneko (28 KB)
11:00 Comparative genomics of the mammalian Y chromosomes
Dr. Yoko Kuroki (RIKEN Advanced Science Institute, Yokohama)
Abstract Kuroki (28 KB)
11:30 Primate Transcriptome Evolution at the Cellular Level
Dr. Thomas Giger (Max Planck Institute for Evolutionary Anthropology, Leipzig)
Abstract Giger (32 KB)
12:00 Lunch
13:30 Another view of sequence evolution
Prof. Dr. Arndt von Haeseler (Center for Integrative Bioinformatics, Vienna)
Abstract von Haeseler (192 KB)
14:00 Genome evolution in wild house mice
Dr. Meike Teschke (Max-Planck-Institute for Evolutionary Biology, Plön)
Abstract Teschke (32 KB)
14:30 Neutral non-equilibrium population genetics: a case study in wild tomatoes
Prof. Dr. Wolfgang Stephan (Munich University)
Abstact Stephan (68 KB)
15:00 Coffee break
15:30 Summary, perspectives, wrap-up
19:00 Dinner